ij.process
Class BinaryProcessor

java.lang.Object
  ij.process.ImageProcessor
      ij.process.ByteProcessor
          ij.process.BinaryProcessor

public class BinaryProcessor

extends ByteProcessor

This class processes binary images.

Field Summary

Fields inherited from class ij.process.ByteProcessor

pixels, snapshotPixels

Fields inherited from class ij.process.ImageProcessor

antialiasedText, baseCM, BLACK, BLACK_AND_WHITE_LUT, bLUT1, bLUT2, boldFont, CENTER_JUSTIFY, clipXMax, clipXMin, clipYMax, clipYMin, cm, cm2, cTable, cx, cy, defaultColorModel, drawingColor, font, fontMetrics, gLUT1, gLUT2, height, histogramMax, histogramMin, histogramSize, image, img, interpolate, inversionTested, invertedLut, justification, LEFT_JUSTIFY, lineWidth, lutAnimation, lutUpdateMode, maxThreshold, minThreshold, newPixels, NO_LUT_UPDATE, NO_THRESHOLD, OVER_UNDER_LUT, raster, RED_LUT, RIGHT_JUSTIFY, rLUT1, rLUT2, roiHeight, roiWidth, roiX, roiY, sampleModel, snapshotHeight, snapshotWidth, source, width, xMax, xMin, yMax, yMin

Constructor Summary

BinaryProcessor(ByteProcessor ip)
Creates a BinaryProcessor from a ByteProcessor.

Method Summary

void	outline()
void	skeletonize() Uses a lookup table to repeatably removes pixels from the edges of objects in a binary image, reducing them to single pixel wide skeletons.

Methods inherited from class ij.process.ByteProcessor

applyLut, applyTable, convolve, convolve3x3, copyBits, createImage, createProcessor, crop, dilate, dilate, drawPixel, duplicate, erode, erode, fill, filter, flipVertical, get, get, getf, getf, getHistogram, getHistogram, getInterpolatedPixel, getMax, getMin, getPixel, getPixels, getPixelsCopy, getPixelValue, getSnapshotPixels, medianFilter, noise, putPixel, putPixelValue, reset, reset, resetMinAndMax, resize, rotate, scale, set, set, setBackgroundValue, setColor, setf, setf, setFromFloatArrays, setFromFloatProcessors, setMinAndMax, setPixels, setPixels, setSnapshotPixels, setValue, snapshot, threshold, toFloat, toFloatArrays, toFloatProcessors

Methods inherited from class ij.process.ImageProcessor

abs, add, add, and, autoThreshold, convertToByte, convertToFloat, convertToRGB, convertToShort, drawDot, drawDot2, drawLine, drawOval, drawPolygon, drawRect, drawString, drawString, exp, fill, fillOval, fillPolygon, findEdges, flipHorizontal, gamma, getAutoThreshold, getAutoThreshold, getBestIndex, getCalibrationTable, getColorModel, getColumn, getCurrentColorModel, getDefaultColorModel, getFloatArray, getFontMetrics, getHeight, getHistogramMax, getHistogramMin, getHistogramSize, getIndexSampleModel, getIntArray, getInterpolate, getInterpolatedValue, getLine, getLutUpdateMode, getMask, getMaskArray, getMaxThreshold, getMinThreshold, getNChannels, getPixel, getPixelCount, getRoi, getRow, getStringWidth, getWidth, hideProgress, insert, invert, invertLut, isColorLut, isInvertedLut, isKillable, isPseudoColorLut, lineTo, log, makeDefaultColorModel, maskSizeError, max, maxValue, min, minValue, moveTo, multiply, or, putColumn, putPixel, putRow, resetBinaryThreshold, resetRoi, resetThreshold, resize, rotateLeft, rotateRight, setAntialiasedText, setCalibrationTable, setClipRect, setColor, setColorModel, setFloatArray, setFont, setHistogramRange, setHistogramSize, setIntArray, setInterpolate, setJustification, setLineWidth, setLutAnimation, setMask, setProgressBar, setRoi, setRoi, setRoi, setRoi, setSnapshotCopyMode, setThreshold, sharpen, showProgress, smooth, sqr, sqrt, toString, xor

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

BinaryProcessor

public BinaryProcessor(ByteProcessor ip)

Creates a BinaryProcessor from a ByteProcessor. The ByteProcessor must contain a binary image (pixels values are either 0 or 255). Backgound is assumed to be white.

Method Detail

skeletonize

public void skeletonize()

Uses a lookup table to repeatably removes pixels from the edges of objects in a binary image, reducing them to single pixel wide skeletons. Based on an a thinning algorithm by by Zhang and Suen (CACM, March 1984, 236-239). There is an entry in the table for each of the 256 possible 3x3 neighborhood configurations. An entry of '1' means delete pixel on first pass, '2' means delete pixel on second pass, and '3' means delete on either pass. A graphical representation of the 256 neighborhoods indexed by the table is available at "http://rsb.info.nih.gov/ij/images/skeletonize-table.gif".

Overrides:

skeletonize in class ByteProcessor

outline

public void outline()

Overrides:

outline in class ByteProcessor